Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798197.1_cds_XP_016459080.1_5226
CDS Infomation

[gene=LOC107782675] [db_xref=GeneID:107782675] [protein=protein EFFECTOR OF TRANSCRIPTION 2-like] [protein_id=XP_016459080.1] [location=complement(join(8179..9279,9814..10188,10691..10780))] [gbkey=CDS]
Sequence

ATGGGAGATACTCACAGATCCATCACCGTTCGGCTGAAAAGAGAAGACTGTAAGCGCACA
AAGCACGACTCTGCTTTCTCCGATTGGAAGATTCTAATTGGGCCTAATGATTGGACGGAT
TATTTACTGGGGAAAGAAGGAGGAGCAGAGAAATATAGGACTCAGAACCTGCCAAACTGC
ACCTCCTGCTCTGGAGTTTATGAGCTGGGAGTAGCTGTGACACGACACCAAGCTGGGCGA
GAGGCGAGCAGACTTGACCCTGATTATATTGTTCCTGTATATGTTGGAAAATCTGACAAT
GTTAGGACTAGGCTACAGCGGTATGGCCGTGAAGGTGCTCATTTAGAGAATGGCTGCTCC
AATAGTGCACTGCACGACCAAGTAAATGTATCTGCTTCAAAGAGAGCAGGATTGTTTACA
GAAGCATTCTCAAGAGGCTTCTCTATCGTTTATAGGTGGGCACCTATGAATGACAACAAA
GACGCTGAGAAAACTGAATCCCAGCTGCTCGACAGATTTGACTATGCTTGGAATAAAGGC
AGTAATGGCTTACGTCGCCACAATGATGTTCTCCACAAACTTGATGGCATTTCAAGAGCA
ACTCGTCTTCCTGCTTTTGTCAGGAAGCTTCAATTGTCCCTTGAGAAACAAAAAGGTGTC
AGAATCAAACCTTGCAAGCCCCTTTTGTTGGAGAACGGATCTGATTTTCATGATAGTTTC
AAAAGCACTTATTTCCTTCCCCAAATCTTCAAATTTGGTCGATCAAAGCCAAGAATAGTT
TCACTAAGTTCCGGTGTAAATGGTGATCCAAATACTACTTGTGGTGTAGCTTTGGGTCAT
GGATCTGTTTGTATGAGGCCTCCAATAACGGGAAATAAACGATGTGCTGAGCACAAGGGA
ATGAAGGTAAATGGTGTAAATTCCAAGTTGATTGCAGAAGGAAATTCATCTGTGATAAAT
GAGAGCACAAGACCTTGCGCAAGTAGAGGCGAGGAAAATGCTCCAATTTGTGGGTTTATC
TTGGATGGTGGTGCTCCTTGTGCAAGAAAACCATTCCAGAGAAATAAAAGATGCTTGGAG
CACAAGGGAAGGAGAAATCGAGGCTGCATTTCTCAGCCAGTGACAGACAAAAATGGCCAG
TCTTTACTGGAATACAGGACTTATTCTAGTAATGATTGTCATCAGATGTTATCCCGTAGG
GCTGATACACAGCACCCTCAAGATTTCTCCAGCTGTCCTCTTATCAACCAGAACCACAGT
GTCATATGTGGAGTTCATTTAACCGATGGTAGTTTCTGCACCAGGCAACCTGTAGCAGGA
AGAAAACGGTGTGAAGAACACAAGGGTATGAGGGTTAAAGAACCCATTTCTAAGCAACTA
GGTGCAGAAATACCAAGCGTATTTGCAGGTACAGCTGCCAAAAGTAGCAGTGGGAAAAAG
CATTATAATGTAGACATTCCATCAGTTAGCCGTTCTCCAACTTGTGGACAACATTGCGTA
ATGGTTCTTTTTGCAGAAGGAAACCTTCGGAAGGTACTAAAAGATGTTGGCAGCACAAAG
TCATGA

Peptide Sequence

PEP ID

XP_016459080.1
PEP Infomation

PREDICTED: protein EFFECTOR OF TRANSCRIPTION 2-like [Nicotiana tabacum]
Sequence

MGDTHRSITVRLKREDCKRTKHDSAFSDWKILIGPNDWTDYLLGKEGGAEKYRTQNLPNC
TSCSGVYELGVAVTRHQAGREASRLDPDYIVPVYVGKSDNVRTRLQRYGREGAHLENGCS
NSALHDQVNVSASKRAGLFTEAFSRGFSIVYRWAPMNDNKDAEKTESQLLDRFDYAWNKG
SNGLRRHNDVLHKLDGISRATRLPAFVRKLQLSLEKQKGVRIKPCKPLLLENGSDFHDSF
KSTYFLPQIFKFGRSKPRIVSLSSGVNGDPNTTCGVALGHGSVCMRPPITGNKRCAEHKG
MKVNGVNSKLIAEGNSSVINESTRPCASRGEENAPICGFILDGGAPCARKPFQRNKRCLE
HKGRRNRGCISQPVTDKNGQSLLEYRTYSSNDCHQMLSRRADTQHPQDFSSCPLINQNHS
VICGVHLTDGSFCTRQPVAGRKRCEEHKGMRVKEPISKQLGAEIPSVFAGTAAKSSSGKK
HYNVDIPSVSRSPTCGQHCVMVLFAEGNLRKVLKDVGSTKS

Transcript Sequence

Gene sequence data has not been registered.